Basic Information
Locus ID:
gene-LOC132604040
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 120943181 | 120950388 | + | gene-LOC132604040 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 38,686.12 Da | 48.11 | 65.21 | -0.63 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 85 | 337 | 4.7E-81 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 225 | 327 | 1.57E-18 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 222 | 340 | 6.1E-42 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 227 | 328 | 25.628542 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 46 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 28 | 45 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 145 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 18 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G65670.2 | indole-3-acetic acid inducible 9. auxin (indole-3-acetic acid) induced gene | 0 |
| RefSeq | XP_049375750.1 | auxin-responsive protein IAA8-like [Solanum verrucosum] | 0 |
| Q38827 | Auxin-responsive protein IAA9 OS=Arabidopsis thaliana OX=3702 GN=IAA9 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2X063 | Auxin-responsive protein OS=Capsicum baccatum OX=33114 GN=CQW23_10635 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology