Basic Information
Locus ID:
gene-LOC132604019
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
ATR1
Description:
belongs to the flavoprotein pyridine nucleotide cytochrome reductase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 120431832 | 120452930 | - | gene-LOC132604019 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.09 | 26,120.64 Da | 48.08 | 85.39 | -0.22 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00667 | FAD binding domain | 18 | 125 | 3.2E-35 | IPR003097 |
| SUPERFAMILY | SSF63380 | Riboflavin synthase domain-like | 18 | 138 | 1.7E-37 | IPR017938 |
| SUPERFAMILY | SSF52343 | Ferredoxin reductase-like, C-terminal NADP-linked domain | 115 | 232 | 3.34E-26 | IPR039261 |
| Gene3D | G3DSA:1.20.990.10 | - | 7 | 83 | 1.7E-17 | IPR023173 |
| Gene3D | G3DSA:3.40.50.80 | - | 120 | 232 | 2.7E-33 | IPR039261 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G24520.2 | P450 reductase 1. Encodes a cyp450 reductase likely to be involved in phenylpropanoid metabolism. | 0 |
| RefSeq | XP_015073633.2 | NADPH--cytochrome P450 reductase [Solanum pennellii] | 0 |
| P37116 | NADPH--cytochrome P450 reductase OS=Vigna radiata var. radiata OX=3916 PE=1 SV=1 | 0 | |
| TrEMBL | A0A5N5NML8 | CPR OS=Salix brachista OX=2182728 GN=DKX38_002567 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Brassicaceae | Schrenkiella parvula | 1 | SpUn0657_0010.v2.2 |
| Hydrocharitaceae | Thalassia testudinum | 2 | gene.Thate02g14120, gene.Thate08g08970 |
| Poaceae | Lolium multiflorum | 1 | gene-QYE76_032376 |
| Poaceae | Puccinellia tenuiflora | 1 | Pt_Chr0402840 |
| Poaceae | Zea mays | 5 | Zm00001eb010260_P001, Zm00001eb040630_P001 ... |
| Salicaceae | Populus euphratica | 1 | populus_peu32170 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132604019 |