Basic Information
Locus ID:
gene-LOC132603993
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Anaphase-promoting complex subunit 11 RING-H2 finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 119231920 | 119233456 | + | gene-LOC132603993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.95 | 39,957.72 Da | 66.80 | 75.00 | -0.54 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd16461 | RING-H2_EL5_like | 156 | 199 | 1.25587E-17 | - |
| Pfam | PF13639 | Ring finger domain | 156 | 199 | 2.8E-14 | IPR001841 |
| SUPERFAMILY | SSF57850 | RING/U-box | 151 | 214 | 2.78E-23 | - |
| Gene3D | G3DSA:3.30.40.10 | Zinc/RING finger domain, C3HC4 (zinc finger) | 133 | 207 | 4.0E-22 | IPR013083 |
| SMART | SM01197 | FANCL_C_2 | 153 | 207 | 0.004 | - |
| SMART | SM00184 | ring_2 | 157 | 198 | 8.6E-8 | IPR001841 |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 157 | 199 | 13.035139 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 213 | 232 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 352 | - | - |
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G72220.1 | RING/U-box superfamily protein. | 0 |
| RefSeq | XP_009619570.1 | RING-H2 finger protein ATL54-like [Nicotiana tomentosiformis] | 0 |
| Q8LFY8 | RING-H2 finger protein ATL54 OS=Arabidopsis thaliana OX=3702 GN=ATL54 PE=2 SV=2 | 0 | |
| TrEMBL | A0A1S4BA52 | RING-type E3 ubiquitin transferase OS=Nicotiana tabacum OX=4097 GN=LOC107806152 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology