Basic Information
Locus ID:
gene-LOC132603861
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Fizzy-related
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 113852813 | 113860870 | - | gene-LOC132603861 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.46 | 53,121.99 Da | 53.14 | 74.61 | -0.48 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00400 | WD domain, G-beta repeat | 332 | 372 | 0.032 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 199 | 268 | 1.4E-6 | IPR024977 |
| Pfam | PF00400 | WD domain, G-beta repeat | 421 | 457 | 7.6E-5 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 292 | 327 | 1.4E-5 | IPR001680 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 170 | 463 | 1.14E-59 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 154 | 462 | 6.3E-124 | IPR015943 |
| SMART | SM00320 | WD40_4 | 247 | 284 | 0.054 | IPR001680 |
| SMART | SM00320 | WD40_4 | 288 | 327 | 4.9E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 374 | 415 | 390.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 418 | 457 | 1.4E-8 | IPR001680 |
| SMART | SM00320 | WD40_4 | 160 | 201 | 460.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 330 | 372 | 0.0027 | IPR001680 |
| SMART | SM00320 | WD40_4 | 204 | 244 | 0.021 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 295 | 336 | 13.482671 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 295 | 327 | 10.943775 | - |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 425 | 458 | 11.919224 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 219 | 253 | 10.074014 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 425 | 458 | 14.41838 | IPR001680 |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 444 | 458 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G22910.1 | FIZZY-related 2. | 0 |
| RefSeq | XP_009607144.1 | protein FIZZY-RELATED 2-like [Nicotiana tomentosiformis] | 0 |
| Q9M7I2 | B-type cell cycle switch protein ccs52A OS=Medicago truncatula OX=3880 GN=CCS52A PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J6IRA7 | Protein fizzy-related 2 OS=Nicotiana attenuata OX=49451 GN=FZR2_1 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology