Basic Information
Locus ID:
gene-LOC132603692
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Aux IAA proteins are short-lived transcriptional factors that function as repressors of early auxin response genes at low auxin concentrations
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 105592521 | 105595685 | + | gene-LOC132603692 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.92 | 30,430.92 Da | 44.83 | 70.98 | -0.58 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02309 | AUX/IAA family | 39 | 265 | 4.4E-87 | IPR033389 |
| SUPERFAMILY | SSF54277 | CAD & PB1 domains | 154 | 255 | 1.81E-22 | - |
| Gene3D | G3DSA:3.10.20.90 | - | 148 | 268 | 3.1E-44 | - |
| ProSiteProfiles | PS51745 | PB1 domain profile. | 154 | 256 | 27.756866 | IPR000270 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 11 | 28 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 30 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G29080.1 | phytochrome-associated protein 2. phytochrome-associated protein 2 (PAP2) | 0 |
| RefSeq | XP_009793769.1 | PREDICTED: auxin-responsive protein IAA27-like [Nicotiana sylvestris] | 0 |
| Q9ZSY8 | Auxin-responsive protein IAA27 OS=Arabidopsis thaliana OX=3702 GN=IAA27 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U7Y3E1 | Auxin-responsive protein OS=Nicotiana sylvestris OX=4096 GN=LOC104240600 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology