Basic Information
Locus ID:
gene-LOC132603334
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 27920766 | 27925055 | - | gene-LOC132603334 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.34 | 73,139.10 Da | 45.44 | 90.17 | -0.34 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 358 | 626 | 6.4E-28 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 160 | 179 | 0.58 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 40 | 83 | 1.2E-6 | IPR013210 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 358 | 628 | 9.55E-45 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 209 | 4.54E-26 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 228 | 6.3E-39 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 322 | 429 | 5.3E-17 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 430 | 647 | 7.8E-33 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 354 | 632 | 24.725325 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 360 | 382 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 223 | 243 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35390.1 | Leucine-rich repeat protein kinase family protein. Encodes a member of the receptor-like kinase family of genes. In pollen tubes, it accumulates in the plasma membrane of the apical growing tip through the process of exocytosis. | 0 |
| RefSeq | XP_016580169.2 | pollen receptor-like kinase 4 [Capsicum annuum] | 0 |
| C0LGU0 | Pollen receptor-like kinase 1 OS=Arabidopsis thaliana OX=3702 GN=PRK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2Z1V7 | Protein kinase domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_19532 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology