Basic Information
Locus ID:
gene-LOC132603175
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
EIN3-binding F-box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 13652572 | 13656087 | - | gene-LOC132603175 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.82 | 66,038.74 Da | 47.13 | 105.50 | 0.14 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13516 | Leucine Rich repeat | 242 | 264 | 0.51 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 190 | 213 | 0.0052 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 533 | 555 | 0.016 | IPR001611 |
| Pfam | PF12937 | F-box-like | 51 | 84 | 1.1E-5 | IPR001810 |
| Pfam | PF13516 | Leucine Rich repeat | 215 | 238 | 0.0051 | IPR001611 |
| Pfam | PF13516 | Leucine Rich repeat | 453 | 475 | 0.21 | IPR001611 |
| SUPERFAMILY | SSF52047 | RNI-like | 142 | 615 | 1.05E-38 | - |
| SUPERFAMILY | SSF52058 | L domain-like | 268 | 463 | 9.01E-10 | - |
| SUPERFAMILY | SSF81383 | F-box domain | 42 | 87 | 3.66E-8 | IPR036047 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 230 | 418 | 1.5E-36 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 114 | 229 | 1.7E-26 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 419 | 618 | 1.0E-33 | IPR032675 |
| Gene3D | G3DSA:1.20.1280.50 | - | 43 | 91 | 3.7E-6 | - |
| SMART | SM00367 | LRR_CC_2 | 559 | 584 | 22.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 216 | 241 | 3.0E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 190 | 215 | 9.4E-6 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 400 | 425 | 190.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 427 | 452 | 4.5 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 374 | 399 | 240.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 533 | 557 | 5.8E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 453 | 478 | 0.015 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 164 | 189 | 0.021 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 348 | 373 | 0.26 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 480 | 505 | 39.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 242 | 267 | 4.5E-4 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 322 | 347 | 85.0 | IPR006553 |
| SMART | SM00367 | LRR_CC_2 | 507 | 532 | 0.01 | IPR006553 |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25350.1 | EIN3-binding F box protein 2. Arabidopsis thaliana EIN3-binding F-box protein 2 (EBF2) mRNA. Part of the SCF complex, it is located in the nucleus and is involved in the ethylene-response pathway. | 0 |
| RefSeq | XP_019255684.1 | PREDICTED: EIN3-binding F-box protein 1-like [Nicotiana attenuata] | 0 |
| Q708Y0 | EIN3-binding F-box protein 2 OS=Arabidopsis thaliana OX=3702 GN=EBF2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J6HX19 | Ein3-binding f-box protein 1 OS=Nicotiana attenuata OX=49451 GN=EBF1_0 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology