HalophFGD

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Basic Information
Locus ID: gene-LOC132603133
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 12027067 12029363 + gene-LOC132603133
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
8.06 15,708.10 Da 53.81 86.96 -0.17
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF00646 F-box domain 13 48 7.8E-6 IPR001810
SUPERFAMILY SSF81383 F-box domain 13 57 1.7E-8 IPR036047
Gene3D G3DSA:1.20.1280.50 - 6 83 1.3E-5 -
SMART SM00256 fbox_2 11 51 0.0095 IPR001810
Gene Ontology
Molecular Function:
GO:0005515 (protein binding)
Best hit
Source Best Hit ID Description E-value
TAIR AT3G23880.1 F-box and associated interaction domains-containing protein. 0
RefSeq XP_016575397.1 F-box/kelch-repeat protein At3g23880 [Capsicum annuum] 0
TrEMBL A0A1J6HWX6 F-boxkelch-repeat protein (Fragment) OS=Nicotiana attenuata OX=49451 GN=A4A49_60599 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Solanaceae Lycium barbarum 7 gene-LOC132601986, gene-LOC132601987, gene-LOC132603133 ...
gene-LOC132612653, gene-LOC132630050, gene-LOC132630200, gene-LOC132640303
Solanaceae Solanum chilense 6 SOLCI000005900, SOLCI001662300, SOLCI001819600 ...
SOLCI003371300, SOLCI003557000, SOLCI006041800
Solanaceae Solanum pennellii 4 gene-LOC107001609, gene-LOC107010212, gene-LOC107025894 ...
gene-LOC107031041
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.