Basic Information
Locus ID:
gene-LOC132603114
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Translocase of chloroplast 159/132, membrane anchor domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 11201970 | 11210960 | + | gene-LOC132603114 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.02 | 89,307.02 Da | 42.50 | 88.06 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04548 | AIG1 family | 172 | 306 | 1.7E-21 | IPR006703 |
| Pfam | PF11886 | Translocase of chloroplast 159/132, membrane anchor domain | 518 | 783 | 8.3E-120 | IPR024283 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 164 | 299 | 1.55E-19 | IPR027417 |
| Gene3D | G3DSA:3.40.50.300 | - | 147 | 390 | 1.6E-54 | IPR027417 |
| TIGRFAM | TIGR00993 | 3a0901s04IAP86: chloroplast protein import component Toc86/159, G and M domains | 60 | 784 | 1.0E-207 | IPR005690 |
| ProSiteProfiles | PS51720 | AIG1-type G domain profile. | 168 | 399 | 27.575968 | IPR006703 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 513 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 492 | 519 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 58 | 78 | - | - |
| Coils | Coil | Coil | 142 | 162 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G20300.1 | Avirulence induced gene (AIG1) family protein. | 0 |
| RefSeq | XP_006359492.1 | PREDICTED: translocase of chloroplast 90, chloroplastic [Solanum tuberosum] | 0 |
| Q6S5G3 | Translocase of chloroplast 90, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=TOC90 PE=1 SV=1 | 0 | |
| TrEMBL | M1D0Y4 | Protein translocase OS=Solanum tuberosum OX=4113 GN=102578154 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology