Basic Information
Locus ID:
gene-LOC132603055
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein ENHANCED DISEASE RESISTANCE
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 7427438 | 7451468 | - | gene-LOC132603055 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.23 | 83,792.36 Da | 46.77 | 83.99 | -0.42 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00177 | START | 217 | 413 | 1.39837E-34 | - |
| Pfam | PF01852 | START domain | 235 | 351 | 3.5E-8 | IPR002913 |
| Pfam | PF07059 | Protein of unknown function (DUF1336) | 530 | 735 | 6.1E-71 | IPR009769 |
| SUPERFAMILY | SSF55961 | Bet v1-like | 205 | 384 | 5.38E-33 | - |
| Gene3D | G3DSA:3.30.530.20 | - | 213 | 413 | 7.6E-31 | IPR023393 |
| ProSiteProfiles | PS50848 | START domain profile. | 221 | 413 | 21.14847 | IPR002913 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 432 | 473 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 463 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G35180.1 | Protein of unknown function (DUF1336). | 0 |
| RefSeq | XP_004242555.1 | protein ENHANCED DISEASE RESISTANCE 2 isoform X1 [Solanum lycopersicum] | 0 |
| F4JSE7 | Protein ENHANCED DISEASE RESISTANCE 2 OS=Arabidopsis thaliana OX=3702 GN=EDR2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A6N2C213 | START domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_003016 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Acanthaceae | Avicennia marina | 1 | jg31577 |
| Aizoaceae | Mesembryanthemum crystallinum | 1 | gene_8914 |
| Amaranthaceae | Atriplex hortensis | 2 | Ah008542, Ah014173 |
| Amaranthaceae | Beta vulgaris | 1 | BVRB_8g192590 |
| Amaranthaceae | Salicornia bigelovii | 2 | Sbi_jg25430, Sbi_jg9273 |
| Amaranthaceae | Salicornia europaea | 1 | Seu_jg19320 |
| Amaranthaceae | Suaeda aralocaspica | 1 | GOSA_00011105 |
| Amaranthaceae | Suaeda glauca | 2 | Sgl41844, Sgl46644 |
| Amaranthaceae | Chenopodium album | 3 | gene:ENSEOMG00000010446, gene:ENSEOMG00000032016 ... |
| Amaranthaceae | Chenopodium quinoa | 3 | CQ.Regalona.r1.8AG0023400, CQ.Regalona.r1.8AG0023410 ... |
| Apiaceae | Apium graveolens | 2 | Ag2G00450, Ag3G01372 |
| Arecaceae | Cocos nucifera | 1 | COCNU_11G011910 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC103719029 |
| Asparagaceae | Asparagus officinalis | 1 | AsparagusV1_08.799.V1.1 |
| Asteraceae | Flaveria trinervia | 3 | Ftri15G13973, Ftri3G13089, Ftri7G22913 |
| Brassicaceae | Arabidopsis thaliana | 1 | AT5G35180.4 |
| Brassicaceae | Eutrema salsugineum | 1 | Thhalv10003438m.g.v1.0 |
| Brassicaceae | Schrenkiella parvula | 1 | Sp7g07190.v2.2 |
| Brassicaceae | Brassica nigra | 1 | BniB07g018090.2N |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq03G2506 |
| Casuarinaceae | Casuarina glauca | 1 | Cgl03G2643 |
| Cymodoceaceae | Cymodocea nodosa | 1 | gene.Cymno01g06550 |
| Hydrocharitaceae | Thalassia testudinum | 1 | gene.Thate04g20250 |
| Malvaceae | Hibiscus hamabo Siebold & Zucc. | 1 | nbisL1-mrna-271 |
| Nitrariaceae | Nitraria sibirica | 1 | evm.TU.LG07.165 |
| Plantaginaceae | Plantago ovata | 1 | Pov_00000945 |
| Plumbaginaceae | Limonium bicolor | 2 | Lb1G03768, Lb6G31991 |
| Poaceae | Echinochloa crus-galli | 2 | BH08.1726, CH08.1866 |
| Poaceae | Eleusine coracana subsp. coracana | 3 | gene-QOZ80_8AG0632110, gene-QOZ80_8AG0632120 ... |
| Poaceae | Hordeum vulgare | 1 | HORVU.MOREX.r3.5HG0470940.1 |
| Poaceae | Lolium multiflorum | 2 | gene-QYE76_031395, gene-QYE76_032016 |
| Poaceae | Oryza coarctata | 1 | Oco16G008700 |
| Poaceae | Oryza sativa | 1 | LOC_Os08g34060.2 |
| Poaceae | Paspalum vaginatum | 1 | gene-BS78_07G148000 |
| Poaceae | Sporobolus alterniflorus | 2 | Chr16G015130, Chr17G014600 |
| Poaceae | Thinopyrum elongatum | 1 | Tel5E01G297600 |
| Poaceae | Triticum dicoccoides | 2 | gene_TRIDC5AG028370, gene_TRIDC5BG029760 |
| Poaceae | Triticum aestivum | 3 | TraesCS5A02G173000.1, TraesCS5B02G170400.1 ... |
| Poaceae | Zea mays | 2 | Zm00001eb041240_P001, Zm00001eb041250_P001 |
| Poaceae | Zoysia japonica | 2 | nbis-gene-17044, nbis-gene-17049 |
| Poaceae | Zoysia macrostachya | 1 | Zma_g24120 |
| Portulacaceae | Portulaca oleracea | 2 | evm.TU.LG04.1110, evm.TU.LG05.1653 |
| Posidoniaceae | Posidonia oceanica | 1 | gene.Posoc03g12300 |
| Rhizophoraceae | Bruguiera sexangula | 3 | evm.TU.Scaffold_10_RagTag.155, evm.TU.Scaffold_4_RagTag.2214 ... |
| Rhizophoraceae | Carallia pectinifolia | 3 | nbisL1-mrna-13940, nbisL1-mrna-25262, nbisL1-mrna-9713 |
| Rhizophoraceae | Ceriops tagal | 2 | nbisL1-mrna-13169, nbisL1-mrna-21259 |
| Rhizophoraceae | Ceriops zippeliana | 3 | nbisL1-mrna-16587, nbisL1-mrna-4967, nbisL1-mrna-4968 |
| Rhizophoraceae | Kandelia candel | 2 | evm.TU.utg000008l.1302, evm.TU.utg000033l.97 |
| Rhizophoraceae | Kandelia obovata | 3 | Maker00000049, Maker00001185, Maker00014702 |
| Rhizophoraceae | Rhizophora apiculata | 2 | nbisL1-mrna-16672, nbisL1-mrna-1881 |
| Rhizophoraceae | Rhizophora mangle | 2 | nbisL1-mrna-14543, nbisL1-mrna-22252 |
| Salicaceae | Populus euphratica | 1 | populus_peu05640 |
| Solanaceae | Lycium barbarum | 1 | gene-LOC132603055 |
| Solanaceae | Solanum chilense | 1 | SOLCI000899000 |
| Solanaceae | Solanum pennellii | 1 | gene-LOC107026334 |
| Tamaricaceae | Reaumuria soongarica | 1 | STRG.12327_chr02_- |
| Tamaricaceae | Tamarix chinensis | 1 | TC10G1096 |
| Zosteraceae | Zostera marina | 1 | Zosma03g01770.v3.1 |