Basic Information
Locus ID:
gene-LOC132602899
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 2519774 | 2527244 | - | gene-LOC132602899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.17 | 70,097.12 Da | 35.29 | 94.14 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 80 | 128 | 2.7E-6 | IPR001611 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 1.6E-12 | IPR013210 |
| Pfam | PF00069 | Protein kinase domain | 295 | 560 | 5.0E-41 | IPR000719 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 190 | 6.38E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 276 | 564 | 7.65E-76 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 24 | 207 | 4.5E-54 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 263 | 370 | 1.9E-35 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 371 | 580 | 3.0E-60 | - |
| SMART | SM00220 | serkin_6 | 294 | 563 | 3.4E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 294 | 579 | 36.032524 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 300 | 322 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G30520.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_049359953.1 | probable LRR receptor-like serine/threonine-protein kinase At4g30520 [Solanum verrucosum] | 0 |
| Q8VYT3 | Probable LRR receptor-like serine/threonine-protein kinase At4g30520 OS=Arabidopsis thaliana OX=3702 GN=At4g30520 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2WAG4 | Putative LRR receptor-like serine/threonine-protein kinase OS=Capsicum baccatum OX=33114 GN=CQW23_16248 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology