Basic Information
Locus ID:
gene-LOC132602815
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Cell division cycle 20.2, cofactor of APC complex-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 161672471 | 161675930 | + | gene-LOC132602815 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.15 | 50,297.82 Da | 47.44 | 73.11 | -0.53 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd00200 | WD40 | 159 | 428 | 1.71135E-42 | - |
| Pfam | PF00400 | WD domain, G-beta repeat | 394 | 428 | 9.1E-4 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 258 | 292 | 2.3E-6 | IPR001680 |
| Pfam | PF00400 | WD domain, G-beta repeat | 305 | 343 | 0.0084 | IPR001680 |
| Pfam | PF12894 | Anaphase-promoting complex subunit 4 WD40 domain | 176 | 233 | 1.3E-5 | IPR024977 |
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 140 | 432 | 1.05E-57 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 84 | 431 | 1.2E-123 | IPR015943 |
| SMART | SM00320 | WD40_4 | 389 | 428 | 5.5E-6 | IPR001680 |
| SMART | SM00320 | WD40_4 | 170 | 208 | 0.071 | IPR001680 |
| SMART | SM00320 | WD40_4 | 346 | 386 | 220.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 301 | 343 | 9.5E-5 | IPR001680 |
| SMART | SM00320 | WD40_4 | 253 | 292 | 1.0E-7 | IPR001680 |
| SMART | SM00320 | WD40_4 | 211 | 249 | 2.5 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 176 | 217 | 11.277069 | IPR001680 |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 260 | 301 | 13.716598 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 396 | 429 | 10.416506 | - |
| ProSiteProfiles | PS50082 | Trp-Asp (WD) repeats profile. | 396 | 429 | 12.513543 | IPR001680 |
| ProSiteProfiles | PS50294 | Trp-Asp (WD) repeats circular profile. | 260 | 292 | 11.312864 | - |
| ProSitePatterns | PS00678 | Trp-Asp (WD) repeats signature. | 415 | 429 | - | IPR019775 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33270.1 | Transducin family protein / WD-40 repeat family protein. putative cdc20 protein (CDC20.1) | 0 |
| RefSeq | XP_006347329.1 | PREDICTED: cell division cycle 20.2, cofactor of APC complex-like isoform X1 [Solanum tuberosum] | 0 |
| Q9SZA4 | Cell division cycle 20.1, cofactor of APC complex OS=Arabidopsis thaliana OX=3702 GN=CDC20-1 PE=1 SV=1 | 0 | |
| TrEMBL | M1CKM2 | Cell division control 20 OS=Solanum tuberosum OX=4113 GN=102581964 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology