Basic Information
Locus ID:
gene-LOC132602727
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine-threonine protein kinase, plant-type
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 434782 | 435117 | + | gene-LOC132602727 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 4.90 | 13,061.26 Da | 29.77 | 118.38 | 0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 2 | 110 | 2.2E-15 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 109 | 3.09E-23 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 111 | 1.9E-22 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 1 | 111 | 15.354485 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G46400.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_049359813.1 | LRR receptor-like serine/threonine-protein kinase EFR [Solanum verrucosum] | 0 |
| Q1MX30 | Receptor kinase-like protein Xa21 OS=Oryza sativa subsp. indica OX=39946 GN=XA21 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2YZJ6 | Protein kinase domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_18712 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 2 | gene-LOC132602727, gene-LOC132602728 |