Basic Information
Locus ID:
gene-LOC132602105
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box kelch-repeat protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 8022465 | 8023968 | + | gene-LOC132602105 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.00 | 43,626.58 Da | 41.19 | 86.64 | -0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07734 | F-box associated | 193 | 340 | 1.0E-6 | IPR006527 |
| Pfam | PF00646 | F-box domain | 2 | 42 | 1.8E-9 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 1 | 40 | 2.22E-11 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 41 | 1.0E-8 | - |
| SMART | SM00256 | fbox_2 | 4 | 42 | 9.2E-5 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 97 | 336 | 4.0E-23 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 31 | 10.636728 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_019256450.1 | PREDICTED: F-box/kelch-repeat protein At3g06240-like [Nicotiana attenuata] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A314L1W6 | F-boxkelch-repeat protein OS=Nicotiana attenuata OX=49451 GN=A4A49_51165 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 9 | gene-LOC132601228, gene-LOC132601230, gene-LOC132601247 ... |