Basic Information
Locus ID:
gene-LOC132602035
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 1289868 | 1293206 | - | gene-LOC132602035 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.62 | 64,845.18 Da | 32.63 | 103.20 | 0.03 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 305 | 556 | 1.3E-29 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 26 | 196 | 3.78E-26 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 292 | 557 | 5.4E-50 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 378 | 570 | 1.4E-26 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 279 | 377 | 8.8E-31 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 23 | 217 | 1.1E-39 | IPR032675 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 303 | 561 | 24.993872 | IPR000719 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G48380.1 | BAK1-interacting receptor-like kinase 1. Encodes a BAK1-interacting receptor-like kinase named BIR1. Negatively regulates multiple plant resistance signaling pathways, one of which is the SOBIR1(AT2G31880)-dependent pathway. | 0 |
| RefSeq | XP_049359832.1 | probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Solanum verrucosum] | 0 |
| Q9ASS4 | Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana OX=3702 GN=At5g48380 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8H7Q9 | probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Capsicum annuum OX=4072 GN=LOC107877163 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 2 | gene-LOC132601924, gene-LOC132602035 |
| Solanaceae | Solanum chilense | 1 | SOLCI004988400 |
| Solanaceae | Solanum pennellii | 2 | gene-LOC107006670, gene-LOC107025476 |