Basic Information
Locus ID:
gene-LOC132601985
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-Box protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 133049513 | 133050646 | - | gene-LOC132601985 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.03 | 43,605.86 Da | 51.15 | 95.60 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 3 | 31 | 3.1E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 3 | 40 | 1.02E-9 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 1 | 41 | 2.9E-7 | - |
| SMART | SM00256 | fbox_2 | 4 | 43 | 8.1E-4 | IPR001810 |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 97 | 207 | 1.9E-13 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 1 | 35 | 10.186324 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12560.1 | F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. | 0 |
| RefSeq | XP_019256450.1 | PREDICTED: F-box/kelch-repeat protein At3g06240-like [Nicotiana attenuata] | 0 |
| Q9SU30 | F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G2WBF3 | F-box domain-containing protein OS=Capsicum baccatum OX=33114 GN=CQW23_16455 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 9 | gene-LOC132601228, gene-LOC132601230, gene-LOC132601247 ... |