Basic Information
Locus ID:
gene-LOC132601915
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
C-terminus of AA_permease
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 126795403 | 126798161 | - | gene-LOC132601915 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.51 | 65,730.94 Da | 30.55 | 107.83 | 0.47 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13520 | Amino acid permease | 78 | 467 | 2.6E-46 | IPR002293 |
| Pfam | PF13906 | C-terminus of AA_permease | 517 | 567 | 5.6E-17 | IPR029485 |
| Gene3D | G3DSA:1.20.1740.10 | Amino acid/polyamine transporter I | 72 | 508 | 3.9E-97 | - |
| PIRSF | PIRSF006060 | AA_transporter | 57 | 515 | 2.9E-72 | - |
| PIRSF | PIRSF006060 | AA_transporter | 450 | 588 | 0.091 | - |
Gene Ontology
Biological Process:
Molecular Function:
Cellular Component:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G21120.1 | amino acid transporter 1. Encodes a member of the cationic amino acid transporter (CAT) subfamily of amino acid polyamine choline transporters. Mediates efficient uptake of Lys, Arg and Glu in a yeast system. | 0 |
| RefSeq | XP_006342695.1 | PREDICTED: cationic amino acid transporter 1-like [Solanum tuberosum] | 0 |
| Q84MA5 | Cationic amino acid transporter 1 OS=Arabidopsis thaliana OX=3702 GN=CAT1 PE=1 SV=1 | 0 | |
| TrEMBL | M1DS55 | Amino acid transport protein AAT1 OS=Solanum tuberosum OX=4113 GN=102601781 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology