Basic Information
Locus ID:
gene-LOC132601776
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Plastocyanin-like domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 113925073 | 113926003 | - | gene-LOC132601776 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.89 | 16,823.35 Da | 24.09 | 90.58 | 0.28 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04216 | Phytocyanin | 23 | 121 | 1.87215E-40 | - |
| Pfam | PF02298 | Plastocyanin-like domain | 33 | 115 | 5.5E-22 | IPR003245 |
| SUPERFAMILY | SSF49503 | Cupredoxins | 21 | 122 | 2.09E-31 | IPR008972 |
| Gene3D | G3DSA:2.60.40.420 | - | 21 | 127 | 7.9E-34 | IPR008972 |
| ProSiteProfiles | PS51485 | Phytocyanin domain profile. | 23 | 123 | 31.31711 | IPR003245 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G27200.1 | Cupredoxin superfamily protein. | 0 |
| RefSeq | XP_049398962.1 | blue copper protein 1a-like [Solanum stenotomum] | 0 |
| G7L0H3 | Blue copper protein 1a OS=Medicago truncatula OX=3880 GN=MTR_7g086140 PE=2 SV=1 | 0 | |
| TrEMBL | K4DFY1 | Phytocyanin domain-containing protein OS=Solanum lycopersicum OX=4081 GN=101257640 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology