Basic Information
Locus ID:
gene-LOC132601342
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
F-box associated domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 17198336 | 17200722 | + | gene-LOC132601342 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.98 | 29,600.55 Da | 42.62 | 84.19 | -0.21 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00646 | F-box domain | 7 | 47 | 2.1E-6 | IPR001810 |
| SUPERFAMILY | SSF81383 | F-box domain | 8 | 41 | 1.1E-7 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 3 | 43 | 1.5E-6 | - |
| SMART | SM00256 | fbox_2 | 8 | 48 | 9.4E-5 | IPR001810 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 2 | 48 | 9.417986 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G07610.1 | F-box family protein. | 0 |
| RefSeq | XP_033508035.1 | F-box protein At4g19940-like [Nicotiana tomentosiformis] | 0 |
| Q9FLS0 | F-box protein At5g07610 OS=Arabidopsis thaliana OX=3702 GN=At5g07610 PE=2 SV=1 | 0 | |
| TrEMBL | M1DZV4 | Isoform 2 of F-box protein OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 6 | gene-LOC132601342, gene-LOC132609287, gene-LOC132631037 ... |