Basic Information
Locus ID:
gene-LOC132601323
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 159580941 | 159585298 | - | gene-LOC132601323 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.18 | 43,441.37 Da | 34.95 | 80.34 | -0.38 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd13999 | STKc_MAP3K-like | 90 | 358 | 7.43899E-115 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 86 | 357 | 2.7E-63 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 55 | 357 | 3.28E-77 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 73 | 167 | 6.1E-18 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 184 | 382 | 3.0E-62 | - |
| SMART | SM00220 | serkin_6 | 84 | 361 | 1.7E-60 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 84 | 361 | 41.45998 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 225 | 237 | - | IPR008271 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 219 | 237 | 1.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 181 | 194 | 1.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 329 | 351 | 1.7E-15 | IPR001245 |
| PRINTS | PR00109 | Tyrosine kinase catalytic domain signature | 285 | 307 | 1.7E-15 | IPR001245 |
| Coils | Coil | Coil | 16 | 36 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G50000.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_049345241.1 | serine/threonine-protein kinase STY13-like [Solanum verrucosum] | 0 |
| Q9FGB1 | Serine/threonine-protein kinase 52 OS=Arabidopsis thaliana OX=3702 GN=CBC2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G3C9N3 | Protein kinase domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_16632 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology