HalophFGD

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Basic Information
Locus ID: gene-LOC132601228
Species & Taxonomic ID: Lycium barbarum & 112863
Genome Assembly: GCF_019175385.1
Description: A Receptor for Ubiquitination Targets
Maps and Mapping Data
Chromosome Start End Strand ID
chr7 8028326 8033815 + gene-LOC132601228
Protein Data
Protein Properties:
Theoretical pI Molecular Weight Instability Index Aliphatic Index GRAVY
4.86 35,003.97 Da 43.29 97.97 -0.07
Protein Domain:
Category ID Description Start End Evalue/Score InterPro ID
Pfam PF07734 F-box associated 134 244 4.4E-6 IPR006527
TIGRFAM TIGR01640 F_box_assoc_1: F-box protein interaction domain 61 253 4.9E-19 IPR017451
Best hit
Source Best Hit ID Description E-value
TAIR AT4G12560.1 F-box and associated interaction domains-containing protein. Encodes CPR30 (Constitutive Expresser of PR Genes 30), a F-Box protein that functions as a negative regulator of defense response. 0
RefSeq XP_019256450.1 PREDICTED: F-box/kelch-repeat protein At3g06240-like [Nicotiana attenuata] 0
Swiss-Prot Q9SU30 F-box protein CPR1 OS=Arabidopsis thaliana OX=3702 GN=CPR1 PE=1 SV=2 0
TrEMBL A0A314L1W6 F-boxkelch-repeat protein OS=Nicotiana attenuata OX=49451 GN=A4A49_51165 PE=4 SV=1 0
Expression
First Prev Next Last
BioProject Accession TPM Cultivar Tissue Development Stage Sample Name Description
No sample metadata found.
Network
🔍 Protein-Protein Interaction Network
Orthology
Family Species Count Orthologous Genes
Solanaceae Lycium barbarum 9 gene-LOC132601228, gene-LOC132601230, gene-LOC132601247 ...
gene-LOC132601252, gene-LOC132601985, gene-LOC132602105, gene-LOC132619416, gene-LOC132619418, gene-LOC132619422
Maintained by Hengyu Yan - College of Agronomy - Qingdao Agricultural University © 2024 All Rights Reserved.