Basic Information
Locus ID:
gene-LOC132600850
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Small ubiquitin-related modifier
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 15320092 | 15324085 | + | gene-LOC132600850 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.73 | 11,974.45 Da | 32.34 | 71.43 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11976 | Ubiquitin-2 like Rad60 SUMO-like | 25 | 94 | 5.3E-16 | IPR022617 |
| SUPERFAMILY | SSF54236 | Ubiquitin-like | 11 | 99 | 4.6E-19 | IPR029071 |
| Gene3D | G3DSA:3.10.20.90 | - | 1 | 99 | 5.0E-24 | - |
| ProSiteProfiles | PS50053 | Ubiquitin domain profile. | 23 | 99 | 12.944685 | IPR000626 |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55160.1 | small ubiquitin-like modifier 2. Encodes a small ubiquitin-like modifier (SUMO) polypeptide that becomes covalently attached to various intracellular protein targets, much like ubiquitination, leading to post-translational modification of those targets. SUMO2 can form SUMO chains through lysine residue 10 during in vitro assays. | 0 |
| RefSeq | XP_016568088.1 | small ubiquitin-related modifier 2 isoform X2 [Capsicum annuum] | 0 |
| Q9FLP6 | Small ubiquitin-related modifier 2 OS=Arabidopsis thaliana OX=3702 GN=SUMO2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G2ZTP7 | Small ubiquitin-related modifier OS=Capsicum annuum OX=4072 GN=LOC107866575 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology