Basic Information
Locus ID:
gene-LOC132600674
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 7931968 | 7944247 | - | gene-LOC132600674 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.33 | 152,492.61 Da | 49.27 | 82.55 | -0.61 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 93 | 423 | 7.8E-112 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 87 | 458 | 1.77E-119 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 81 | 436 | 4.2E-139 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 85 | 432 | 4.3E-164 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 87 | 424 | 123.130646 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 320 | 331 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 374 | 395 | 6.0E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 159 | 180 | 6.0E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 288 | 305 | 6.0E-41 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 321 | 339 | 6.0E-41 | IPR001752 |
| Coils | Coil | Coil | 1174 | 1194 | - | - |
| Coils | Coil | Coil | 51 | 71 | - | - |
| Coils | Coil | Coil | 1116 | 1147 | - | - |
| Coils | Coil | Coil | 573 | 600 | - | - |
| Coils | Coil | Coil | 1279 | 1313 | - | - |
| Coils | Coil | Coil | 431 | 458 | - | - |
| Coils | Coil | Coil | 1202 | 1236 | - | - |
| Coils | Coil | Coil | 1008 | 1035 | - | - |
| Coils | Coil | Coil | 607 | 627 | - | - |
| Coils | Coil | Coil | 1092 | 1112 | - | - |
| Coils | Coil | Coil | 706 | 747 | - | - |
| Coils | Coil | Coil | 795 | 829 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G44050.1 | P-loop containing nucleoside triphosphate hydrolases superfamily protein. | 0 |
| RefSeq | XP_016547588.1 | kinesin-like protein KIN-12E isoform X1 [Capsicum annuum] | 0 |
| F4J1U4 | Kinesin-like protein KIN-12E OS=Arabidopsis thaliana OX=3702 GN=KIN12E PE=3 SV=1 | 0 | |
| TrEMBL | A0A1U8EK52 | phragmoplast orienting kinesin 2 isoform X1 OS=Capsicum annuum OX=4072 GN=LOC107847694 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology