Basic Information
Locus ID:
gene-LOC132600351
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 548154 | 551257 | + | gene-LOC132600351 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.50 | 75,787.88 Da | 39.40 | 100.14 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF13855 | Leucine rich repeat | 235 | 289 | 3.5E-10 | IPR001611 |
| Pfam | PF00069 | Protein kinase domain | 386 | 659 | 1.1E-53 | IPR000719 |
| Pfam | PF00560 | Leucine Rich Repeat | 180 | 202 | 0.86 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 385 | 664 | 2.29E-77 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 40 | 297 | 3.63E-50 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 369 | 463 | 3.1E-21 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 464 | 667 | 5.1E-61 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 38 | 194 | 7.3E-43 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 195 | 321 | 1.9E-30 | IPR032675 |
| SMART | SM00220 | serkin_6 | 384 | 663 | 7.0E-43 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 384 | 664 | 41.233837 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 513 | 525 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G25930.1 | Protein kinase family protein with leucine-rich repeat domain. | 0 |
| RefSeq | XP_009628517.1 | LRR receptor-like serine/threonine-protein kinase SIK1 isoform X3 [Nicotiana tomentosiformis] | 0 |
| Q9M6A7 | Leucine-rich repeat receptor-like kinase protein CLV1B OS=Glycine max OX=3847 GN=CLV1B PE=2 SV=1 | 0 | |
| TrEMBL | A0A1S4CP48 | leucine-rich repeat receptor-like serine/threonine-protein kinase BAM1 isoform X1 OS=Nicotiana tabacum OX=4097 GN=LOC107821115 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology