Basic Information
Locus ID:
gene-LOC132599899
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Aspartic proteinase CDR1-like
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 102745507 | 102746947 | + | gene-LOC132599899 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.81 | 50,277.95 Da | 39.12 | 90.36 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05476 | pepsin_A_like_plant | 98 | 447 | 5.71724E-81 | IPR034161 |
| Pfam | PF14543 | Xylanase inhibitor N-terminal | 98 | 274 | 1.5E-51 | IPR032861 |
| Pfam | PF14541 | Xylanase inhibitor C-terminal | 299 | 443 | 6.3E-25 | IPR032799 |
| SUPERFAMILY | SSF50630 | Acid proteases | 94 | 448 | 2.91E-90 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 278 | 450 | 1.1E-42 | IPR021109 |
| Gene3D | G3DSA:2.40.70.10 | Acid Proteases | 81 | 274 | 7.6E-53 | IPR021109 |
| ProSiteProfiles | PS51767 | Peptidase family A1 domain profile. | 98 | 443 | 37.301411 | IPR033121 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 113 | 124 | - | IPR001969 |
| ProSitePatterns | PS00141 | Eukaryotic and viral aspartyl proteases active site. | 328 | 339 | - | IPR001969 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 104 | 124 | 6.0E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 328 | 339 | 6.0E-5 | IPR001461 |
| PRINTS | PR00792 | Pepsin (A1) aspartic protease family signature | 419 | 434 | 6.0E-5 | IPR001461 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G64830.1 | Eukaryotic aspartyl protease family protein. | 0 |
| RefSeq | XP_047255758.1 | aspartic proteinase CDR1-like [Capsicum annuum] | 0 |
| Q6XBF8 | Aspartic proteinase CDR1 OS=Arabidopsis thaliana OX=3702 GN=CDR1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G3ALS3 | Peptidase A1 domain-containing protein OS=Capsicum annuum OX=4072 GN=T459_03066 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology