Basic Information
Locus ID:
gene-LOC132599864
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein kinase domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 100503888 | 100508531 | + | gene-LOC132599864 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 53,977.75 Da | 54.05 | 85.25 | -0.37 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 189 | 450 | 2.3E-41 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 170 | 459 | 1.37E-72 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 158 | 258 | 2.4E-24 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 262 | 464 | 4.3E-58 | - |
| SMART | SM00220 | serkin_6 | 185 | 457 | 2.0E-31 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 185 | 451 | 34.873539 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 191 | 213 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 304 | 316 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 87 | 103 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 24 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G18910.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_009772472.1 | PREDICTED: receptor-like cytosolic serine/threonine-protein kinase RBK2 [Nicotiana sylvestris] | 0 |
| Q8RXC8 | Receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Arabidopsis thaliana OX=3702 GN=RBK2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1S3Z8G5 | receptor-like cytosolic serine/threonine-protein kinase RBK2 OS=Nicotiana tabacum OX=4097 GN=LOC107784130 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology