Basic Information
Locus ID:
gene-LOC132599762
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 259400 | 260692 | + | gene-LOC132599762 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.82 | 49,108.60 Da | 38.94 | 98.95 | 0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF12937 | F-box-like | 16 | 59 | 9.2E-6 | IPR001810 |
| Pfam | PF07734 | F-box associated | 241 | 355 | 9.0E-9 | IPR006527 |
| SUPERFAMILY | SSF81383 | F-box domain | 10 | 63 | 2.75E-8 | IPR036047 |
| Gene3D | G3DSA:1.20.1280.50 | - | 12 | 69 | 7.5E-6 | - |
| TIGRFAM | TIGR01640 | F_box_assoc_1: F-box protein interaction domain | 136 | 373 | 3.5E-19 | IPR017451 |
| ProSiteProfiles | PS50181 | F-box domain profile. | 12 | 60 | 10.292301 | IPR001810 |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_015158835.1 | PREDICTED: putative F-box protein At3g21120 [Solanum tuberosum] | 0 |
| TrEMBL | M1DA37 | S-locus F-box protein 9 OS=Solanum tuberosum OX=4113 GN=107058052 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Solanaceae | Lycium barbarum | 1 | gene-LOC132599762 |
| Solanaceae | Solanum chilense | 3 | SOLCI000907300, SOLCI001142300, SOLCI001142400 |
| Solanaceae | Solanum pennellii | 4 | gene-LOC107022514, gene-LOC107022919, gene-LOC114074350 ... |