Basic Information
Locus ID:
gene-LOC132599688
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 157024591 | 157028552 | + | gene-LOC132599688 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.62 | 71,160.75 Da | 40.33 | 97.80 | -0.10 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 366 | 629 | 8.64136E-89 | - |
| Pfam | PF00069 | Protein kinase domain | 363 | 624 | 7.7E-40 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 28 | 62 | 2.1E-8 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 33 | 207 | 3.91E-30 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 364 | 630 | 3.37E-61 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 328 | 434 | 1.7E-19 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 135 | 230 | 1.2E-17 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 134 | 3.7E-22 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 647 | 1.8E-50 | - |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 360 | 629 | 33.95483 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 366 | 388 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G48480.1 | receptor-like kinase 1. Arabidopsis thaliana receptor-like protein kinase (RKL1) gene | 0 |
| RefSeq | XP_049365926.1 | probable inactive receptor kinase At1g48480 [Solanum verrucosum] | 0 |
| Q9LP77 | Probable inactive receptor kinase At1g48480 OS=Arabidopsis thaliana OX=3702 GN=RKL1 PE=1 SV=1 | 0 | |
| TrEMBL | M1CT55 | ATP binding protein OS=Solanum tuberosum OX=4113 GN=102588664 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology