Basic Information
Locus ID:
gene-LOC132599237
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Ubiquitin fusion degradation protein 1 homolog isoform X1
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 134602692 | 134609330 | - | gene-LOC132599237 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.16 | 35,204.49 Da | 56.98 | 62.29 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF03152 | Ubiquitin fusion degradation protein UFD1 | 13 | 184 | 7.3E-80 | IPR004854 |
| Gene3D | G3DSA:3.10.330.10 | - | 109 | 182 | 3.8E-33 | - |
| Gene3D | G3DSA:2.40.40.50 | - | 6 | 107 | 1.5E-45 | IPR042299 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 257 | 277 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 189 | 315 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 285 | 305 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G21270.1 | ubiquitin fusion degradation 1. | 0 |
| RefSeq | XP_016539841.1 | ubiquitin fusion degradation protein 1 homolog [Capsicum annuum] | 0 |
| Q92890 | Ubiquitin recognition factor in ER-associated degradation protein 1 OS=Homo sapiens OX=9606 GN=UFD1 PE=1 SV=3 | 0 | |
| TrEMBL | A0A1U8E098 | ubiquitin fusion degradation protein 1 homolog OS=Capsicum annuum OX=4072 GN=LOC107840482 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology