Basic Information
Locus ID:
gene-LOC132599224
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Src homology 3 domains
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 134457394 | 134464297 | - | gene-LOC132599224 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.65 | 41,144.98 Da | 43.43 | 75.24 | -0.59 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF14604 | Variant SH3 domain | 308 | 356 | 1.0E-10 | IPR001452 |
| SUPERFAMILY | SSF50044 | SH3-domain | 275 | 359 | 2.76E-16 | IPR036028 |
| SUPERFAMILY | SSF103657 | BAR/IMD domain-like | 47 | 256 | 2.27E-22 | IPR027267 |
| Gene3D | G3DSA:1.20.1270.60 | Arfaptin homology (AH) domain/BAR domain | 43 | 266 | 5.7E-10 | IPR027267 |
| Gene3D | G3DSA:2.30.30.40 | SH3 Domains | 300 | 359 | 2.9E-15 | - |
| SMART | SM00326 | SH3_2 | 304 | 359 | 2.6E-12 | IPR001452 |
| ProSiteProfiles | PS50002 | Src homology 3 (SH3) domain profile. | 301 | 360 | 18.965584 | IPR001452 |
| Coils | Coil | Coil | 147 | 174 | - | - |
| Coils | Coil | Coil | 191 | 211 | - | - |
| Coils | Coil | Coil | 1 | 21 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G34660.1 | SH3 domain-containing protein. | 0 |
| RefSeq | XP_019253657.1 | PREDICTED: SH3 domain-containing protein 2 [Nicotiana attenuata] | 0 |
| Q8VWF1 | SH3 domain-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=SH3P2 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1J6I300 | Sh3 domain-containing protein 2 OS=Nicotiana attenuata OX=49451 GN=SH3P2_3 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology