Basic Information
Locus ID:
gene-LOC132599094
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Belongs to the protein kinase superfamily. Ser Thr protein kinase family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 132362688 | 132366637 | - | gene-LOC132599094 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 101,779.28 Da | 39.24 | 85.85 | -0.18 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 597 | 870 | 9.06193E-95 | - |
| Pfam | PF00069 | Protein kinase domain | 592 | 865 | 1.7E-47 | IPR000719 |
| Pfam | PF12799 | Leucine Rich repeats (2 copies) | 388 | 432 | 1.5E-7 | IPR025875 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 60 | 3.2E-5 | IPR013210 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 327 | 362 | 1.2E-4 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 39 | 431 | 4.76E-45 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 570 | 877 | 1.82E-79 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 669 | 887 | 2.2E-55 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 323 | 1.8E-79 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 324 | 449 | 6.0E-35 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 555 | 668 | 2.2E-36 | - |
| SMART | SM00369 | LRR_typ_2 | 87 | 109 | 240.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 185 | 208 | 51.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 411 | 433 | 59.0 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 110 | 133 | 1.7 | IPR003591 |
| SMART | SM00369 | LRR_typ_2 | 233 | 255 | 250.0 | IPR003591 |
| SMART | SM00220 | serkin_6 | 591 | 871 | 9.0E-46 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 591 | 870 | 39.891106 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 716 | 728 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 597 | 619 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 444 | 483 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 918 | 943 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G66150.1 | transmembrane kinase 1. receptor-like transmembrane kinase I (TMK1) | 0 |
| RefSeq | XP_015061628.1 | receptor protein kinase TMK1-like isoform X1 [Solanum pennellii] | 0 |
| P43298 | Receptor protein kinase TMK1 OS=Arabidopsis thaliana OX=3702 GN=TMK1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A6N2AV61 | Protein kinase domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_022862 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology