Basic Information
Locus ID:
gene-LOC132599085
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Phragmoplast orienting kinesin
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 132175664 | 132191695 | - | gene-LOC132599085 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.14 | 331,874.56 Da | 51.66 | 88.21 | -0.62 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00225 | Kinesin motor domain | 231 | 562 | 1.3E-107 | IPR001752 |
| SUPERFAMILY | SSF52540 | P-loop containing nucleoside triphosphate hydrolases | 225 | 596 | 1.84E-117 | IPR027417 |
| Gene3D | G3DSA:3.40.850.10 | Kinesin motor domain | 220 | 574 | 5.7E-134 | IPR036961 |
| SMART | SM00129 | kinesin_4 | 223 | 570 | 2.1E-158 | IPR001752 |
| ProSiteProfiles | PS50067 | Kinesin motor domain profile. | 225 | 562 | 120.213387 | IPR001752 |
| ProSitePatterns | PS00411 | Kinesin motor domain signature. | 458 | 469 | - | IPR019821 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 459 | 477 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 426 | 443 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 297 | 318 | 4.2E-40 | IPR001752 |
| PRINTS | PR00380 | Kinesin heavy chain signature | 512 | 533 | 4.2E-40 | IPR001752 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 124 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 161 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 71 | 92 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 16 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 30 | 70 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2540 | 2560 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 886 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 889 | 905 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2886 | 2915 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 2536 | 2560 | - | - |
| Coils | Coil | Coil | 664 | 691 | - | - |
| Coils | Coil | Coil | 1346 | 1366 | - | - |
| Coils | Coil | Coil | 1523 | 1543 | - | - |
| Coils | Coil | Coil | 1004 | 1024 | - | - |
| Coils | Coil | Coil | 2079 | 2099 | - | - |
| Coils | Coil | Coil | 1209 | 1243 | - | - |
| Coils | Coil | Coil | 831 | 865 | - | - |
| Coils | Coil | Coil | 569 | 596 | - | - |
| Coils | Coil | Coil | 934 | 996 | - | - |
| Coils | Coil | Coil | 1110 | 1158 | - | - |
| Coils | Coil | Coil | 2386 | 2490 | - | - |
| Coils | Coil | Coil | 2187 | 2207 | - | - |
| Coils | Coil | Coil | 2804 | 2824 | - | - |
| Coils | Coil | Coil | 2751 | 2771 | - | - |
| Coils | Coil | Coil | 2104 | 2124 | - | - |
| Coils | Coil | Coil | 1954 | 1981 | - | - |
| Coils | Coil | Coil | 1985 | 2033 | - | - |
| Coils | Coil | Coil | 1852 | 1872 | - | - |
| Coils | Coil | Coil | 2847 | 2881 | - | - |
| Coils | Coil | Coil | 1269 | 1296 | - | - |
| Coils | Coil | Coil | 2288 | 2308 | - | - |
| Coils | Coil | Coil | 2232 | 2266 | - | - |
| Coils | Coil | Coil | 2721 | 2741 | - | - |
| Coils | Coil | Coil | 2337 | 2371 | - | - |
| Coils | Coil | Coil | 2658 | 2706 | - | - |
| Coils | Coil | Coil | 1597 | 1631 | - | - |
| Coils | Coil | Coil | 1898 | 1918 | - | - |
Gene Ontology
Biological Process:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G19050.1 | phragmoplast orienting kinesin 2. PHRAGMOPLAST ORIENTING KINESIN 2 is one of the two Arabidopsis homologs isolated in yeast two-hybrid screen for interaction partners of maize gene TANGLED1 (TAN1). Based on sequence homology in their motor domains, POK1 and POK2 belong to the kinesin-12 class which also includes the well-characterized group of phragmoplast-associated kinesins AtPAKRPs. Both kinesins are composed of an N-terminal motor domain throughout the entire C terminus and putative cargo binding tail domains. The expression domains for POK2 constructs were broader than those for POK1; both are expressed in tissues enriched for dividing cells. The phenotype of pok1/pok2 double mutants strongly resembles that of maize tan1 mutants, characterized by misoriented mitotic cytoskeletal arrays and misplaced cell walls. | 0 |
| RefSeq | XP_049351705.1 | kinesin-like protein KIN-12D [Solanum verrucosum] | 0 |
| Q27IK6 | Kinesin-like protein KIN-12D OS=Arabidopsis thaliana OX=3702 GN=KIN12D PE=2 SV=1 | 0 | |
| TrEMBL | A0A2G2Y3P8 | Phragmoplast orienting kinesin 2 OS=Capsicum annuum OX=4072 GN=T459_31728 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology