Basic Information
Locus ID:
gene-LOC132598943
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
mitotic sister chromatid cohesion
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr1 | 155976041 | 155991980 | + | gene-LOC132598943 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 7.16 | 95,058.16 Da | 49.39 | 80.61 | -0.68 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd04508 | TUDOR | 641 | 685 | 0.00391989 | IPR002999 |
| CDD | cd04508 | TUDOR | 753 | 797 | 3.82331E-4 | IPR002999 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 638 | 678 | 8.27E-6 | - |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 526 | 566 | 7.07E-6 | - |
| SUPERFAMILY | SSF48371 | ARM repeat | 34 | 247 | 3.6E-6 | IPR016024 |
| SUPERFAMILY | SSF63748 | Tudor/PWWP/MBT | 750 | 789 | 1.43E-5 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 751 | 799 | 1.2E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 527 | 575 | 7.7E-8 | - |
| Gene3D | G3DSA:2.30.30.140 | - | 639 | 687 | 9.8E-9 | - |
| SMART | SM00333 | TUDOR_7 | 636 | 695 | 5.0E-4 | IPR002999 |
| SMART | SM00333 | TUDOR_7 | 748 | 806 | 0.022 | IPR002999 |
| SMART | SM00333 | TUDOR_7 | 524 | 582 | 0.13 | IPR002999 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 501 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 713 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 629 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 581 | 601 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 350 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 330 | 399 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 505 | 522 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 698 | 737 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 613 | 629 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G80810.5 | - | 0 |
| RefSeq | XP_016490014.1 | PREDICTED: uncharacterized protein LOC107809834 [Nicotiana tabacum] | 0 |
| A8MRD9 | Sister chromatid cohesion protein PDS5 homolog D OS=Arabidopsis thaliana OX=3702 GN=PDS5D PE=2 SV=3 | 0 | |
| TrEMBL | A0A1S4BMC9 | uncharacterized protein LOC107809834 OS=Nicotiana tabacum OX=4097 GN=LOC107809834 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology