Basic Information
Locus ID:
gene-LOC132598829
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
DnaJ molecular chaperone homology domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 128424061 | 128432661 | - | gene-LOC132598829 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.43 | 102,090.32 Da | 42.66 | 61.44 | -0.76 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd06257 | DnaJ | 77 | 132 | 1.55252E-11 | IPR001623 |
| Pfam | PF00226 | DnaJ domain | 77 | 140 | 5.0E-13 | IPR001623 |
| Pfam | PF13634 | Nucleoporin FG repeat region | 545 | 639 | 0.22 | IPR025574 |
| SUPERFAMILY | SSF46565 | Chaperone J-domain | 74 | 143 | 1.18E-12 | IPR036869 |
| Gene3D | G3DSA:1.10.287.110 | DnaJ domain | 64 | 146 | 1.6E-12 | IPR036869 |
| SMART | SM00271 | dnaj_3 | 76 | 135 | 2.7E-9 | IPR001623 |
| ProSiteProfiles | PS50076 | dnaJ domain profile. | 77 | 143 | 11.761339 | IPR001623 |
| ProSitePatterns | PS00636 | Nt-dnaJ domain signature. | 120 | 139 | - | IPR018253 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 881 | 903 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 174 | 238 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 791 | 817 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 780 | 831 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G64360.2 | Chaperone DnaJ-domain superfamily protein. | 0 |
| RefSeq | XP_004230561.1 | uncharacterized protein LOC101249308 [Solanum lycopersicum] | 0 |
| B9KFK6 | Chaperone protein DnaJ OS=Campylobacter lari (strain RM2100 / D67 / ATCC BAA-1060) OX=306263 GN=dnaJ PE=3 SV=1 | 0 | |
| TrEMBL | A0A6N2CBP1 | J domain-containing protein OS=Solanum chilense OX=4083 GN=EJD97_002563 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology