Basic Information
Locus ID:
gene-LOC132598764
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Short Name:
SERK5
Description:
Leucine rich repeat N-terminal domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 127255571 | 127264276 | + | gene-LOC132598764 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.37 | 67,962.90 Da | 39.49 | 97.98 | -0.15 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF00069 | Protein kinase domain | 291 | 562 | 2.9E-45 | IPR000719 |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 26 | 65 | 1.2E-10 | IPR013210 |
| SUPERFAMILY | SSF52058 | L domain-like | 27 | 203 | 2.64E-38 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 269 | 565 | 9.57E-78 | IPR011009 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 204 | 1.3E-56 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 259 | 366 | 5.4E-42 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 367 | 584 | 8.7E-70 | - |
| SMART | SM00220 | serkin_6 | 290 | 564 | 3.3E-33 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 290 | 577 | 36.753361 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 296 | 318 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 413 | 425 | - | IPR008271 |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G33430.1 | BRI1-associated receptor kinase. Leu-rich receptor Serine/threonine protein kinase. Component of BR signaling that interacts with BRI1 in vitro and in vivo to form a heterodimer. Brassinolide-dependent association of BRI1 and BAK1 in vivo. Phosphorylation of both BRI1 and BAK1 on Thr residues was BR dependent. Although BAK1 and BRI1 alone localize in the plasma membrane, when BAK1 and BRI1 are coexpressed, the heterodimer BAK1/BRI1 they form is localized in the endosome. | 0 |
| RefSeq | XP_016539195.2 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 isoform X1 [Capsicum annuum] | 0 |
| Q94F62 | BRASSINOSTEROID INSENSITIVE 1-associated receptor kinase 1 OS=Arabidopsis thaliana OX=3702 GN=BAK1 PE=1 SV=2 | 0 | |
| TrEMBL | A0A2G2W8Z0 | Somatic embryogenesis receptor kinase 1 OS=Capsicum baccatum OX=33114 GN=CQW23_20513 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology