Basic Information
Locus ID:
gene-LOC132598565
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
regulation of response to stimulus
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 123773350 | 123804377 | + | gene-LOC132598565 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.89 | 104,661.17 Da | 35.22 | 93.32 | -0.17 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 636 | 902 | 1.79561E-89 | - |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 634 | 898 | 7.4E-49 | IPR001245 |
| Pfam | PF13855 | Leucine rich repeat | 244 | 300 | 1.2E-6 | IPR001611 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 607 | 898 | 5.53E-80 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 53 | 394 | 2.24E-51 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 186 | 286 | 3.1E-20 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 31 | 185 | 8.9E-40 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 601 | 705 | 5.5E-36 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 706 | 922 | 1.1E-58 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 287 | 409 | 1.3E-14 | IPR032675 |
| SMART | SM00220 | serkin_6 | 630 | 903 | 1.5E-36 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 364 | 385 | 7.673451 | IPR001611 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 630 | 903 | 39.255077 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 750 | 762 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 636 | 658 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 913 | 947 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_006358481.1 | PREDICTED: probable leucine-rich repeat receptor-like protein kinase At5g49770 isoform X1 [Solanum tuberosum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A1U8DV71 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Capsicum annuum OX=4072 GN=LOC107839788 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology