Basic Information
Locus ID:
gene-LOC132598560
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
Protein tyrosine kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 123721502 | 123731802 | + | gene-LOC132598560 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.68 | 103,885.77 Da | 37.02 | 92.08 | -0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 633 | 899 | 2.60353E-93 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 29 | 64 | 1.3E-5 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 631 | 895 | 1.6E-49 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 605 | 900 | 4.37E-79 | IPR011009 |
| SUPERFAMILY | SSF52058 | L domain-like | 45 | 395 | 1.24E-50 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 286 | 438 | 1.4E-15 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 285 | 6.1E-22 | IPR032675 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 599 | 702 | 2.5E-36 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 28 | 186 | 8.7E-39 | IPR032675 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 703 | 922 | 5.7E-58 | - |
| SMART | SM00220 | serkin_6 | 627 | 900 | 5.4E-38 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 627 | 900 | 39.792168 | IPR000719 |
| ProSiteProfiles | PS51450 | Leucine-rich repeat profile. | 268 | 290 | 7.858268 | IPR001611 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 747 | 759 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 633 | 655 | - | IPR017441 |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G49760.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_010314121.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Solanum lycopersicum] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A2G3BUN3 | Protein kinase domain-containing protein OS=Capsicum chinense OX=80379 GN=BC332_22038 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology