Basic Information
Locus ID:
gene-LOC132598446
Species & Taxonomic ID:
Lycium barbarum & 112863
Genome Assembly:
GCF_019175385.1
Description:
PAPA-1-like conserved region
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 121957566 | 121962381 | - | gene-LOC132598446 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.13 | 60,513.68 Da | 52.29 | 60.38 | -0.96 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF04795 | PAPA-1-like conserved region | 404 | 489 | 7.7E-20 | IPR006880 |
| Pfam | PF04438 | HIT zinc finger | 505 | 536 | 2.9E-6 | IPR007529 |
| SMART | SM01406 | PAPA_1_2 | 404 | 489 | 3.2E-29 | IPR006880 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 31 | 77 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 141 | 173 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 388 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 15 | 30 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 78 | 95 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 392 | 458 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 14 | 102 | - | - |
| Coils | Coil | Coil | 393 | 430 | - | - |
Gene Ontology
Cellular Component:
KEGG Pathway
KO Term:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G56460.1 | HIT zinc finger ;PAPA-1-like conserved region. | 0 |
| RefSeq | XP_049351080.1 | uncharacterized protein LOC125815611 isoform X1 [Solanum verrucosum] | 0 |
| TrEMBL | M0ZSJ8 | PAPA-1 domain-containing protein OS=Solanum tuberosum OX=4113 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology