Basic Information
Locus ID:
gene-LOC120113095
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Ring finger
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 18338178 | 18354587 | + | gene-LOC120113095 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.88 | 63,749.23 Da | 58.70 | 56.37 | -0.66 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF57850 | RING/U-box | 525 | 580 | 8.39E-5 | - |
| ProSiteProfiles | PS50089 | Zinc finger RING-type profile. | 526 | 581 | 8.933805 | IPR001841 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 476 | 499 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 21 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 27 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 315 | 340 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| RefSeq | XP_038989787.1 | uncharacterized protein LOC120113095 [Phoenix dactylifera] | 0 |
| TrEMBL | A0A8B9AW20 | uncharacterized protein LOC120113095 OS=Phoenix dactylifera OX=42345 GN=LOC120113095 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Arecaceae | Cocos nucifera | 2 | COCNU_11G005480, contig69551977G000010 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120113095 |