Basic Information
Locus ID:
gene-LOC120113038
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Serine threonine-protein kinase-like protein CCR4
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr14 | 8813286 | 8816289 | - | gene-LOC120113038 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.59 | 96,145.85 Da | 48.84 | 89.70 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 579 | 870 | 3.31891E-91 | - |
| Pfam | PF13540 | Regulator of chromosome condensation (RCC1) repeat | 336 | 360 | 5.7E-5 | - |
| Pfam | PF00069 | Protein kinase domain | 574 | 865 | 5.0E-42 | IPR000719 |
| SUPERFAMILY | SSF50985 | RCC1/BLIP-II | 217 | 400 | 3.58E-21 | IPR009091 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 551 | 868 | 4.05E-74 | IPR011009 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 542 | 665 | 7.7E-31 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 666 | 879 | 5.9E-54 | - |
| Gene3D | G3DSA:2.130.10.30 | - | 152 | 409 | 7.2E-25 | IPR009091 |
| SMART | SM00220 | serkin_6 | 573 | 872 | 1.5E-32 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 573 | 872 | 37.445927 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 711 | 723 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 579 | 601 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 44 | 70 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G47850.1 | CRINKLY4 related 4. | 0 |
| RefSeq | XP_038989472.1 | serine/threonine-protein kinase-like protein CCR4 [Phoenix dactylifera] | 0 |
| Q9FIJ6 | Serine/threonine-protein kinase-like protein CCR4 OS=Arabidopsis thaliana OX=3702 GN=CCR4 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AV67 | serine/threonine-protein kinase-like protein CCR4 OS=Phoenix dactylifera OX=42345 GN=LOC120113038 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology