Basic Information
Locus ID:
gene-LOC120112896
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
leucine-rich repeat receptor-like protein kinase At5g49770
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr13 | 8255448 | 8261751 | + | gene-LOC120112896 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.06 | 105,487.72 Da | 38.38 | 86.94 | -0.25 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 633 | 898 | 4.90697E-100 | - |
| Pfam | PF08263 | Leucine rich repeat N-terminal domain | 24 | 60 | 8.3E-4 | IPR013210 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 630 | 896 | 4.1E-49 | IPR001245 |
| SUPERFAMILY | SSF52058 | L domain-like | 31 | 297 | 2.55E-50 | - |
| SUPERFAMILY | SSF52047 | RNI-like | 281 | 398 | 2.12E-9 | - |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 613 | 908 | 2.02E-80 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 703 | 922 | 1.5E-60 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 600 | 702 | 1.2E-35 | - |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 187 | 416 | 4.6E-34 | IPR032675 |
| Gene3D | G3DSA:3.80.10.10 | Ribonuclease Inhibitor | 25 | 186 | 1.2E-40 | IPR032675 |
| SMART | SM00220 | serkin_6 | 627 | 900 | 8.0E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 627 | 901 | 39.763901 | IPR000719 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 633 | 655 | - | IPR017441 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 747 | 759 | - | IPR008271 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 920 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 904 | 935 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G79620.1 | Leucine-rich repeat protein kinase family protein. | 0 |
| RefSeq | XP_038988880.1 | probable leucine-rich repeat receptor-like protein kinase At5g49770 [Phoenix dactylifera] | 0 |
| Q8GZ99 | Leucine-rich repeat receptor protein kinase HPCA1 OS=Arabidopsis thaliana OX=3702 GN=HPCA1 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AR17 | probable leucine-rich repeat receptor-like protein kinase At5g49770 OS=Phoenix dactylifera OX=42345 GN=LOC120112896 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology