Basic Information
Locus ID:
gene-LOC120112420
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
serine threonine-protein kinase
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr11 | 18053039 | 18053871 | - | gene-LOC120112420 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 16,524.78 Da | 38.76 | 88.93 | -0.06 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF11883 | Domain of unknown function (DUF3403) | 105 | 150 | 1.6E-14 | IPR021820 |
| Pfam | PF07714 | Protein tyrosine and serine/threonine kinase | 1 | 101 | 1.5E-9 | IPR001245 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 1 | 132 | 6.93E-18 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 1 | 114 | 2.7E-22 | - |
Gene Ontology
Biological Process:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G65790.1 | receptor kinase 1. An alternatively spliced gene that encodes a functional transmembrane receptor serine/threonine kinase, alternate form may not have transmembrane domain. | 0 |
| RefSeq | XP_038987737.1 | receptor-like serine/threonine-protein kinase SD1-7 [Phoenix dactylifera] | 0 |
| Q39086 | Receptor-like serine/threonine-protein kinase SD1-7 OS=Arabidopsis thaliana OX=3702 GN=SD17 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9AQA9 | receptor-like serine/threonine-protein kinase SD1-7 OS=Phoenix dactylifera OX=42345 GN=LOC120112420 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology
| Family | Species | Count | Orthologous Genes |
|---|---|---|---|
| Amaranthaceae | Salicornia bigelovii | 1 | Sbi_jg58674 |
| Amaranthaceae | Suaeda glauca | 1 | Sgl61814 |
| Amaranthaceae | Chenopodium quinoa | 1 | CQ.Regalona.r1.8AG0000020 |
| Arecaceae | Phoenix dactylifera | 1 | gene-LOC120112420 |
| Asteraceae | Flaveria trinervia | 1 | Ftri15G15711 |
| Casuarinaceae | Casuarina equisetifolia | 1 | Ceq04G1507 |
| Poaceae | Zoysia japonica | 1 | nbis-gene-58424 |
| Rhizophoraceae | Kandelia candel | 1 | add.evm.TU.utg000003l.132 |
| Salicaceae | Populus euphratica | 1 | populus_peu37425 |