halophFGD

Basic Information

Locus ID: gene-LOC120112210

Species & Taxonomic ID: Phoenix dactylifera & 42345

Genome Assembly: GCF_009389715.1

Description: AAA domain

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr10	240236	241174	+	gene-LOC120112210

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.75	30,081.26 Da	48.93	76.84	-0.44

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID
MobiDBLite	mobidb-lite	consensus disorder prediction	204	275	-	-
MobiDBLite	mobidb-lite	consensus disorder prediction	244	258	-	-
Coils	Coil	Coil	55	82	-	-

KEGG Pathway

KO Term:

K10706 (ATP-dependent RNA/DNA helicase, senataxin [EC:5.6.2.5 5.6.2.3])

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_038987000.1	tropomyosin-1, isoforms 33/34-like [Phoenix dactylifera]	0
TrEMBL	A0A8B9AKX8	tropomyosin-1, isoforms 33/34-like OS=Phoenix dactylifera OX=42345 GN=LOC120112210 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

Orthology

Family	Species	Count	Orthologous Genes
Arecaceae	Phoenix dactylifera	21	gene-LOC103697747, gene-LOC103699045, gene-LOC103707104 ... gene-LOC113461124, gene-LOC113463184, gene-LOC120104201, gene-LOC120104350, gene-LOC120105316, gene-LOC120105365, gene-LOC120105629, gene-LOC120105733, gene-LOC120106200, gene-LOC120106848, gene-LOC120107472, gene-LOC120109806, gene-LOC120110663, gene-LOC120111196, gene-LOC120112210, gene-LOC120112246, gene-LOC120112558, gene-LOC120113344