Basic Information
Locus ID:
gene-LOC120111993
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr9 | 12251330 | 12262234 | - | gene-LOC120111993 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 9.48 | 44,767.39 Da | 37.97 | 89.60 | -0.07 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50998 | Quinoprotein alcohol dehydrogenase-like | 116 | 363 | 2.67E-17 | IPR011047 |
| Gene3D | G3DSA:2.130.10.10 | - | 83 | 372 | 2.5E-25 | IPR015943 |
| SMART | SM00320 | WD40_4 | 284 | 323 | 21.0 | IPR001680 |
| SMART | SM00320 | WD40_4 | 324 | 365 | 0.67 | IPR001680 |
| Coils | Coil | Coil | 139 | 159 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G01470.1 | SEC12P-like 2 protein. Sec12p-like protein (GTP exchange protein) that functionally complements yeast sec12 null mutant. Protein is localized to the ER. | 0 |
| RefSeq | XP_038986496.1 | SEC12-like protein 2 [Phoenix dactylifera] | 0 |
| Q39221 | SEC12-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=STL2P PE=1 SV=4 | 0 | |
| TrEMBL | A0A8B9AIE8 | SEC12-like protein 2 OS=Phoenix dactylifera OX=42345 GN=LOC120111993 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology