Basic Information
Locus ID:
gene-LOC120111351
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Fasciclin-like arabinogalactan protein
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr7 | 10973628 | 10975388 | - | gene-LOC120111351 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.78 | 43,075.73 Da | 39.38 | 93.85 | 0.11 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF02469 | Fasciclin domain | 198 | 329 | 3.6E-13 | IPR000782 |
| Pfam | PF02469 | Fasciclin domain | 36 | 113 | 2.4E-6 | IPR000782 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 183 | 330 | 2.88E-18 | IPR036378 |
| SUPERFAMILY | SSF82153 | FAS1 domain | 31 | 174 | 1.44E-17 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 167 | 330 | 6.0E-11 | IPR036378 |
| Gene3D | G3DSA:2.30.180.10 | FAS1 domain | 24 | 166 | 4.7E-10 | IPR036378 |
| SMART | SM00554 | fasc_3 | 225 | 330 | 5.2E-15 | IPR000782 |
| SMART | SM00554 | fasc_3 | 61 | 176 | 0.48 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 25 | 164 | 11.667673 | IPR000782 |
| ProSiteProfiles | PS50213 | FAS1/BIgH3 domain profile. | 186 | 327 | 11.759487 | IPR000782 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 334 | 389 | - | - |
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT4G12730.1 | FASCICLIN-like arabinogalactan 2. AF333971 Arabidopsis thaliana fasciclin-like arabinogalactan-protein 2 (Fla2) mRNA, complete cds | 0 |
| RefSeq | XP_038984204.1 | fasciclin-like arabinogalactan protein 2 [Phoenix dactylifera] | 0 |
| Q9SU13 | Fasciclin-like arabinogalactan protein 2 OS=Arabidopsis thaliana OX=3702 GN=FLA2 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9ALM7 | fasciclin-like arabinogalactan protein 2 OS=Phoenix dactylifera OX=42345 GN=LOC120111351 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology