halophFGD

Basic Information

Locus ID: gene-LOC120111052

Species & Taxonomic ID: Phoenix dactylifera & 42345

Genome Assembly: GCF_009389715.1

Description: Zinc-ribbon, C4HC2 type

Maps and Mapping Data

Chromosome	Start	End	Strand	ID
chr6	10670760	10682805	-	gene-LOC120111052

Protein Data

Protein Properties:

Theoretical pI	Molecular Weight	Instability Index	Aliphatic Index	GRAVY
4.76	19,227.77 Da	42.45	58.94	-0.57

Protein Domain:

Category	ID	Description	Start	End	Evalue/Score	InterPro ID

KEGG Pathway

KO Term:

K19045 (E3 ubiquitin-protein ligase BIG BROTHER and related proteins [EC:2.3.2.27])

Best hit

Source	Best Hit ID	Description	E-value
RefSeq	XP_038983317.1	E3 ubiquitin-protein ligase BIG BROTHER-like [Phoenix dactylifera]	0
TrEMBL	A0A8B9AH60	E3 ubiquitin-protein ligase BIG BROTHER-like OS=Phoenix dactylifera OX=42345 GN=LOC120111052 PE=4 SV=1	0

Expression

BioProject	Accession	TPM	Cultivar	Tissue	Development Stage	Sample Name	Description
No sample metadata found.

Network

🔍 Protein-Protein Interaction Network

Orthology

Family	Species	Count	Orthologous Genes
Acanthaceae	Avicennia marina	5	jg10161, jg1624, jg33997, jg35552, jg8567
Aizoaceae	Mesembryanthemum crystallinum	3	gene_10029, gene_3187, gene_8284
Amaranthaceae	Atriplex hortensis	2	Ah004967, Ah018955
Amaranthaceae	Beta vulgaris	2	BVRB_2g029450, BVRB_4g072440
Amaranthaceae	Salicornia bigelovii	6	Sbi_jg15525, Sbi_jg17968, Sbi_jg21776, Sbi_jg22042 ... Sbi_jg56333, Sbi_jg62594
Amaranthaceae	Salicornia europaea	3	Seu_jg1175, Seu_jg15970, Seu_jg26793
Amaranthaceae	Suaeda aralocaspica	3	GOSA_00006578, GOSA_00008587, GOSA_00023540
Amaranthaceae	Suaeda glauca	6	Sgl02041, Sgl07195, Sgl23876, Sgl29046, Sgl62987, Sgl67607
Amaranthaceae	Chenopodium album	9	gene:ENSEOMG00000002478, gene:ENSEOMG00000011527 ... gene:ENSEOMG00000019513, gene:ENSEOMG00000020093, gene:ENSEOMG00000027200, gene:ENSEOMG00000028966, gene:ENSEOMG00000040483, gene:ENSEOMG00000041485, gene:ENSEOMG00000049935
Amaranthaceae	Chenopodium quinoa	7	CQ.Regalona.r1.2AG0016820, CQ.Regalona.r1.2AG0016830 ... CQ.Regalona.r1.2BG0018610, CQ.Regalona.r1.2BG0018620, CQ.Regalona.r1.3AG0002390, CQ.Regalona.r1.3AG0015590, CQ.Regalona.r1.4AG0001240
Anacardiaceae	Pistacia vera	3	pistato.v30052780, pistato.v30230440, pistato.v30231320
Apiaceae	Apium graveolens	4	Ag10G02636, Ag1G00301, Ag4G02878, Ag5G02696
Arecaceae	Cocos nucifera	4	COCNU_07G007070, COCNU_09G001450, COCNU_10G005280 ... scaffold002397G000010
Arecaceae	Phoenix dactylifera	6	gene-LOC103698390, gene-LOC103711144, gene-LOC103715068 ... gene-LOC120109121, gene-LOC120109122, gene-LOC120111052
Asparagaceae	Asparagus officinalis	3	AsparagusV1_04.3073.V1.1, AsparagusV1_08.1029.V1.1 ... AsparagusV1_10.1090.V1.1
Asteraceae	Flaveria trinervia	6	Ftri11G30953, Ftri12G22974, Ftri17G07168, Ftri18G06270 ... Ftri1G13210, Ftri2G02793
Brassicaceae	Arabidopsis thaliana	2	AT3G63530.1, AT5G52140.1
Brassicaceae	Eutrema salsugineum	2	Thhalv10006197m.g.v1.0, Thhalv10015344m.g.v1.0
Brassicaceae	Schrenkiella parvula	4	Sp2g14040.v2.2, Sp5g00050.v2.2, Sp6g14370.v2.2 ... Sp6g14380.v2.2
Brassicaceae	Brassica nigra	3	BniB02g029610.2N, BniB05g031940.2N, BniB06g060980.2N
Casuarinaceae	Casuarina equisetifolia	3	Ceq02G2082, Ceq05G0484, Ceq05G1941
Casuarinaceae	Casuarina glauca	2	Cgl05G0522, Cgl05G1925
Cymodoceaceae	Cymodocea nodosa	4	gene.Cymno03g04260, gene.Cymno10g06540, gene.Cymno14g04690 ... gene.Cymno14g09250
Hydrocharitaceae	Thalassia testudinum	2	gene.Thate02g38210, gene.Thate08g05360
Malvaceae	Hibiscus hamabo Siebold & Zucc.	3	nbisL1-mrna-2416, nbisL1-mrna-2533, nbisL1-mrna-381
Nitrariaceae	Nitraria sibirica	2	evm.TU.LG03.52, evm.TU.LG09.253
Plantaginaceae	Plantago ovata	2	Pov_00017053, Pov_00030968
Plumbaginaceae	Limonium bicolor	3	Lb1G04559, Lb1G07864, Lb1G07873
Poaceae	Echinochloa crus-galli	10	AH01.4812, AH03.2670, AH09.1980, AH09.1981, BH01.4741 ... BH03.2814, BH09.2141, CH01.5391, CH03.3016, CH09.2286
Poaceae	Eleusine coracana subsp. coracana	5	gene-QOZ80_3AG0235590, gene-QOZ80_4AG0306950 ... gene-QOZ80_4BG0337950, gene-QOZ80_6AG0528960, gene-QOZ80_6BG0482970
Poaceae	Hordeum vulgare	3	HORVU.MOREX.r3.2HG0187130.2, HORVU.MOREX.r3.4HG0384230.1 ... HORVU.MOREX.r3.5HG0497810.1
Poaceae	Lolium multiflorum	2	gene-QYE76_006767, gene-QYE76_045715
Poaceae	Oryza coarctata	5	Oco05G004230, Oco06G004290, Oco07G013530, Oco17G009850 ... Oco18G009870
Poaceae	Oryza sativa	3	LOC_Os03g07790.1, LOC_Os04g48260.1, LOC_Os09g35690.1
Poaceae	Paspalum vaginatum	3	gene-BS78_01G464200, gene-BS78_02G248400 ... gene-BS78_06G204700
Poaceae	Puccinellia tenuiflora	5	Pt_Chr0102445, Pt_Chr0307337, Pt_Chr0307365, Pt_Chr0403184 ... Pt_Chr0701198
Poaceae	Sporobolus alterniflorus	11	Chr01G036020, Chr04G003050, Chr07G008160, Chr0G008460 ... Chr10G013690, Chr11G008650, Chr12G003440, Chr23G006210, Chr25G005140, Chr26G013400, Chr30G005010
Poaceae	Thinopyrum elongatum	3	Tel2E01G690500, Tel4E01G341900, Tel5E01G500800
Poaceae	Triticum dicoccoides	6	gene_TRIDC2AG057870, gene_TRIDC2BG060760 ... gene_TRIDC4AG015580, gene_TRIDC4BG033340, gene_TRIDC5AG046470, gene_TRIDC5BG050260
Poaceae	Triticum aestivum	9	TraesCS2A02G400200.1, TraesCS2B02G418300.1 ... TraesCS2D02G397800.1, TraesCS4A02G112900.1, TraesCS4B02G191300.1, TraesCS4D02G192500.2, TraesCS5A02G312800.1, TraesCS5B02G313800.1, TraesCS5D02G319600.1
Poaceae	Zea mays	4	Zm00001eb005600_P001, Zm00001eb073620_P001 ... Zm00001eb319010_P003, Zm00001eb402080_P004
Poaceae	Zoysia japonica	2	nbis-gene-2748, nbis-gene-35352
Poaceae	Zoysia macrostachya	3	Zma_g1965, Zma_g20266, Zma_g32246
Portulacaceae	Portulaca oleracea	8	evm.TU.LG01.1370, evm.TU.LG08.1708, evm.TU.LG14.657 ... evm.TU.LG16.1563, evm.TU.LG18.1806, evm.TU.LG20.119, evm.TU.LG22.633, evm.TU.LG26.103
Posidoniaceae	Posidonia oceanica	3	gene.Posoc02g10430, gene.Posoc06g11760, gene.Posoc06g19140
Rhizophoraceae	Bruguiera sexangula	2	evm.TU.Scaffold_12_RagTag.10, evm.TU.Scaffold_7_RagTag.329
Rhizophoraceae	Carallia pectinifolia	3	nbisL1-mrna-18936, nbisL1-mrna-24791, nbisL1-mrna-9187
Rhizophoraceae	Ceriops tagal	2	nbisL1-mrna-10253, nbisL1-mrna-12879
Rhizophoraceae	Ceriops zippeliana	3	nbisL1-mrna-15265, nbisL1-mrna-19327, nbisL1-mrna-6965
Rhizophoraceae	Kandelia candel	3	evm.TU.utg000018l.194, evm.TU.utg000027l.562 ... evm.TU.utg000028l.208
Rhizophoraceae	Kandelia obovata	3	Maker00003238, Maker00010525, Maker00018265
Rhizophoraceae	Rhizophora apiculata	3	nbisL1-mrna-5433, nbisL1-mrna-8826, nbisL1-mrna-9537
Rhizophoraceae	Rhizophora mangle	3	nbisL1-mrna-11557, nbisL1-mrna-18760, nbisL1-mrna-20151
Salicaceae	Populus euphratica	5	populus_peu01854, populus_peu04330, populus_peu29237 ... populus_peu35128, populus_peu35960
Solanaceae	Lycium barbarum	3	gene-LOC132631841, gene-LOC132643677, gene-LOC132644592
Solanaceae	Solanum chilense	3	SOLCI000206400, SOLCI002236700, SOLCI005522300
Solanaceae	Solanum pennellii	2	gene-LOC107002835, gene-LOC107010958
Tamaricaceae	Reaumuria soongarica	4	STRG.28646_chr04_-, STRG.6872_chr04_+, gene_4475, gene_6982
Tamaricaceae	Tamarix chinensis	4	TC02G2098, TC02G3710, TC05G1270, TC06G1672
Zosteraceae	Zostera marina	3	Zosma05g05330.v3.1, Zosma05g33420.v3.1, Zosma06g22690.v3.1