Basic Information
Locus ID:
gene-LOC120111010
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
DYW family of nucleic acid deaminases
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr6 | 5982742 | 5988604 | + | gene-LOC120111010 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.93 | 83,717.71 Da | 43.64 | 69.03 | -0.64 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| Pfam | PF01535 | PPR repeat | 529 | 554 | 0.086 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 365 | 386 | 0.14 | IPR002885 |
| Pfam | PF01535 | PPR repeat | 458 | 487 | 2.0E-5 | IPR002885 |
| Pfam | PF14432 | DYW family of nucleic acid deaminases | 620 | 740 | 1.5E-39 | IPR032867 |
| Pfam | PF01535 | PPR repeat | 429 | 455 | 0.058 | IPR002885 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 501 | 592 | 6.5E-12 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 417 | 500 | 4.5E-17 | IPR011990 |
| Gene3D | G3DSA:1.25.40.10 | Tetratricopeptide repeat domain | 361 | 416 | 1.4E-5 | IPR011990 |
| TIGRFAM | TIGR00756 | PPR: pentatricopeptide repeat domain | 458 | 490 | 4.2E-5 | IPR002885 |
| ProSiteProfiles | PS51375 | Pentatricopeptide (PPR) repeat profile. | 455 | 489 | 11.136739 | IPR002885 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 353 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 333 | 355 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 18 | 46 | - | - |
Gene Ontology
Molecular Function:
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT2G25580.1 | Tetratricopeptide repeat (TPR)-like superfamily protein. | 0 |
| RefSeq | XP_038983202.1 | pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like isoform X1 [Phoenix dactylifera] | 0 |
| Q680H3 | Pentatricopeptide repeat-containing protein At2g25580 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H75 PE=2 SV=2 | 0 | |
| TrEMBL | A0A8B9AGU2 | pentatricopeptide repeat-containing protein At4g32450, mitochondrial-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC120111010 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology