Basic Information
Locus ID:
gene-LOC120110753
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
WD40 repeats
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr5 | 14103871 | 14104762 | + | gene-LOC120110753 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 5.58 | 29,564.83 Da | 44.56 | 77.13 | -0.45 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| SUPERFAMILY | SSF50978 | WD40 repeat-like | 45 | 262 | 3.66E-21 | IPR036322 |
| Gene3D | G3DSA:2.130.10.10 | - | 39 | 267 | 3.6E-22 | IPR015943 |
| SMART | SM00320 | WD40_4 | 153 | 191 | 0.0024 | IPR001680 |
| SMART | SM00320 | WD40_4 | 104 | 150 | 2.7 | IPR001680 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 94 | 108 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 84 | 108 | - | - |
Gene Ontology
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT1G12910.1 | Transducin/WD40 repeat-like superfamily protein. Encodes a protein with similarity to the petunia WD repeat protein an11. | 0 |
| RefSeq | XP_038982237.1 | WD repeat-containing protein LWD1-like [Phoenix dactylifera] | 0 |
| Q9LPV9 | WD repeat-containing protein LWD1 OS=Arabidopsis thaliana OX=3702 GN=LWD1 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9A945 | WD repeat-containing protein LWD1-like OS=Phoenix dactylifera OX=42345 GN=LOC120110753 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology