Basic Information
Locus ID:
gene-LOC120110470
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Legume lectin domain
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr4 | 11133456 | 11135847 | + | gene-LOC120110470 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 6.46 | 74,819.43 Da | 40.87 | 85.68 | -0.16 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd14066 | STKc_IRAK | 365 | 631 | 2.688E-94 | - |
| CDD | cd06899 | lectin_legume_LecRK_Arcelin_ConA | 29 | 260 | 1.81215E-83 | IPR001220 |
| Pfam | PF00139 | Legume lectin domain | 29 | 259 | 2.4E-56 | IPR001220 |
| Pfam | PF00069 | Protein kinase domain | 359 | 628 | 1.2E-52 | IPR000719 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 341 | 654 | 9.17E-80 | IPR011009 |
| SUPERFAMILY | SSF49899 | Concanavalin A-like lectins/glucanases | 28 | 261 | 1.59E-59 | IPR013320 |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 321 | 434 | 2.4E-28 | - |
| Gene3D | G3DSA:2.60.120.200 | - | 26 | 268 | 1.7E-63 | - |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 435 | 639 | 3.4E-61 | - |
| SMART | SM00220 | serkin_6 | 359 | 629 | 2.0E-37 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 359 | 646 | 37.700336 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 479 | 491 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 365 | 388 | - | IPR017441 |
Gene Ontology
Biological Process:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT5G55830.1 | Concanavalin A-like lectin protein kinase family protein. | 0 |
| RefSeq | XP_008798407.1 | probable L-type lectin-domain containing receptor kinase S.7 [Phoenix dactylifera] | 0 |
| Q9FHG4 | Probable L-type lectin-domain containing receptor kinase S.7 OS=Arabidopsis thaliana OX=3702 GN=LECRKS7 PE=2 SV=1 | 0 | |
| TrEMBL | A0A8B9A4A4 | probable L-type lectin-domain containing receptor kinase S.7 OS=Phoenix dactylifera OX=42345 GN=LOC120110470 PE=3 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology