Basic Information
Locus ID:
gene-LOC120110259
Species & Taxonomic ID:
Phoenix dactylifera & 42345
Genome Assembly:
GCF_009389715.1
Description:
Lipopolysaccharide kinase (Kdo/WaaP) family
Maps and Mapping Data
| Chromosome | Start | End | Strand | ID |
|---|---|---|---|---|
| chr3 | 15915948 | 15926707 | + | gene-LOC120110259 |
Protein Data
Protein Properties:
| Theoretical pI | Molecular Weight | Instability Index | Aliphatic Index | GRAVY |
|---|---|---|---|---|
| 8.57 | 64,999.88 Da | 45.26 | 87.97 | -0.26 |
Protein Domain:
| Category | ID | Description | Start | End | Evalue/Score | InterPro ID |
|---|---|---|---|---|---|---|
| CDD | cd05117 | STKc_CAMK | 122 | 389 | 4.24191E-130 | - |
| Pfam | PF00069 | Protein kinase domain | 123 | 390 | 2.4E-69 | IPR000719 |
| SUPERFAMILY | SSF47473 | EF-hand | 418 | 572 | 4.41E-15 | IPR011992 |
| SUPERFAMILY | SSF56112 | Protein kinase-like (PK-like) | 120 | 411 | 8.63E-81 | IPR011009 |
| Gene3D | G3DSA:1.10.510.10 | Transferase(Phosphotransferase) domain 1 | 218 | 401 | 6.2E-60 | - |
| Gene3D | G3DSA:1.10.238.10 | - | 409 | 572 | 2.3E-14 | - |
| Gene3D | G3DSA:3.30.200.20 | Phosphorylase Kinase; domain 1 | 116 | 217 | 6.4E-22 | - |
| SMART | SM00220 | serkin_6 | 123 | 390 | 1.6E-99 | IPR000719 |
| ProSiteProfiles | PS50011 | Protein kinase domain profile. | 123 | 390 | 49.544628 | IPR000719 |
| ProSitePatterns | PS00108 | Serine/Threonine protein kinases active-site signature. | 252 | 264 | - | IPR008271 |
| ProSitePatterns | PS00107 | Protein kinases ATP-binding region signature. | 129 | 155 | - | IPR017441 |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 1 | 57 | - | - |
| MobiDBLite | mobidb-lite | consensus disorder prediction | 24 | 44 | - | - |
Gene Ontology
Biological Process:
Molecular Function:
KEGG Pathway
Best hit
| Source | Best Hit ID | Description | E-value |
|---|---|---|---|
| TAIR | AT3G56760.1 | Protein kinase superfamily protein. | 0 |
| RefSeq | XP_038980672.1 | CDPK-related kinase 7-like isoform X1 [Phoenix dactylifera] | 0 |
| Q9LET1 | CDPK-related kinase 7 OS=Arabidopsis thaliana OX=3702 GN=CRK7 PE=1 SV=1 | 0 | |
| TrEMBL | A0A8B9A4S8 | CDPK-related kinase 7-like isoform X1 OS=Phoenix dactylifera OX=42345 GN=LOC120110259 PE=4 SV=1 | 0 |
Expression
| BioProject | Accession | TPM | Cultivar | Tissue | Development Stage | Sample Name | Description |
|---|---|---|---|---|---|---|---|
| No sample metadata found. | |||||||
Orthology